Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
L
M
N
O
P
Q
R
S
T
U
V
W
P
p_class
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_classname
- Static variable in class chemCast.similarity.data.
SimilarityDef
p_color
- Static variable in class chemCast.similarity.data.
Dataset
p_decisionMethod
- Static variable in class chemCast.similarity.data.
ToxTreeSimilarity
p_descriptor
- Static variable in class chemCast.similarity.data.
ChemCastDescriptor
p_descriptor
- Static variable in class chemCast.similarity.data.
DatasetDef
p_descriptors
- Static variable in class chemCast.similarity.data.
ChemCastDescriptorsList
p_descriptors
- Static variable in class chemCast.similarity.data.
DatasetDef
p_endpoint
- Static variable in class chemCast.similarity.data.
Endpoint
p_endpoints
- Static variable in class chemCast.similarity.data.
Endpoints
p_filesource
- Static variable in class chemCast.similarity.data.
DatasetDef
p_group
- Static variable in class chemCast.similarity.data.
Subset
p_groups
- Static variable in class chemCast.similarity.data.
Subsets
p_hasgroups
- Static variable in class chemCast.similarity.data.
SimilarityDef
p_identifier
- Static variable in class chemCast.similarity.data.
DatasetDef
p_identifiers
- Static variable in class chemCast.similarity.data.
DatasetDef
p_maxValue
- Static variable in class chemCast.data.
RangePropertyFilter
p_memorysource
- Static variable in class chemCast.similarity.data.
DatasetDef
p_minValue
- Static variable in class chemCast.data.
RangePropertyFilter
p_name
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_note
- Static variable in class chemCast.similarity.data.
ChemCastDescriptor
p_parameter
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_parameters
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_properties
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_query
- Static variable in class chemCast.similarity.data.
DatasetDef
p_result
- Static variable in class chemCast.similarity.data.
DatasetDef
p_similarity
- Static variable in class chemCast.similarity.data.
SimilarityDef
p_similarityMethods
- Static variable in class chemCast.similarity.data.
SimilarityDefs
p_source
- Static variable in class chemCast.similarity.data.
DatasetDef
p_tag
- Static variable in class chemCast.data.
ObjectPropertyFilter
p_tag
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_template
- Static variable in class chemCast.similarity.data.
DatasetDef
p_type
- Static variable in class chemCast.similarity.data.
ChemCastDescriptor
p_type
- Static variable in class chemCast.similarity.data.
SimilarityDef
p_type
- Static variable in class chemCast.similarity.data.
Subsets
p_use_hydrogens
- Static variable in class chemCast.similarity.data.
NNAtomEnvironmentSimilaritySubsets
p_value
- Static variable in class chemCast.data.
ObjectPropertyFilter
p_value
- Static variable in interface chemCast.similarity.data.
IChemCastObject
p_weight
- Static variable in class chemCast.similarity.data.
ChemCastDescriptor
PairwiseSimilarityFilter
- Class in
chemCast.data
PairwiseSimilarityFilter()
- Constructor for class chemCast.data.
PairwiseSimilarityFilter
PairwiseSimilarityFilter(ISimilarityProcessor)
- Constructor for class chemCast.data.
PairwiseSimilarityFilter
parseXMLDocument(Element)
- Static method in class chemCast.similarity.data.
ChemCastObjectFactory
populateValues(Collection<Comparable>)
- Method in class chemCast.ui.
ObjectPropertyFilterEditor
postProcessDistances(double[])
- Method in class chemCast.weka.
CosineSimilarity
postProcessDistances(double[])
- Method in class chemCast.weka.
DiceSimilarity
postProcessDistances(double[])
- Method in class chemCast.weka.
EuclideanSimilarity
postProcessDistances(double[])
- Method in class chemCast.weka.
JaccardSimilarity
predict()
- Method in class chemCast.similarity.data.
AtomEnvironmentSimilarity
predict(Object, Object)
- Method in class chemCast.similarity.data.
AtomEnvironmentSimilarity
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.similarity.data.
AtomEnvironmentSimilarity
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.similarity.data.
FingerprintSimilaritySubsets
predict()
- Method in class chemCast.similarity.data.
FingerprintSimilaritySubsets
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.similarity.data.
MCSSSimilarity
predict()
- Method in class chemCast.similarity.data.
MCSSSimilarity
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.similarity.data.
NearestNeighborsSimilaritySubsets
predict()
- Method in class chemCast.similarity.data.
NearestNeighborsSimilaritySubsets
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.similarity.data.
ToxTreeSimilarity
predict()
- Method in class chemCast.similarity.data.
ToxTreeSimilarity
predict()
- Method in class chemCast.weka.
AbstractWekaModel
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in interface chemCast.weka.
ISubsetsModel
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.weka.
WekaClustering
predict()
- Method in class chemCast.weka.
WekaClustering
predict()
- Method in class chemCast.weka.
WekaSimilarityModel
predict(Object, Object)
- Method in class chemCast.weka.
WekaSimilarityModel
predict(IAtomContainersList, int, IAtomContainersList, int)
- Method in class chemCast.weka.
WekaSimilarityModel
preprocess(IChemObject)
- Method in class chemCast.data.
AbstractFilter
preprocess(IChemObject)
- Method in interface chemCast.data.
IObjectFilter
preprocess(IChemObject)
- Method in class chemCast.data.
VerhaarSchemeFilter
previous()
- Method in class chemCast.data.
FilteredMoleculesFile
previous()
- Method in class chemCast.data.
MoleculesFile
previousIndex()
- Method in class chemCast.data.
FilteredMoleculesFile
previousIndex()
- Method in class chemCast.data.
MoleculesFile
process(Object)
- Method in class chemCast.similarity.data.
ChemCastDescriptorsList
process(SimilarityModel, Subsets)
- Method in class chemCast.ui.actions.
SimilarityCalculationAction
process(Object)
- Method in class chemCast.weka.
WekaSimilarityModel
processInstance(Subsets, int, int, Instances, Instance)
- Method in class chemCast.weka.
InstanceAdder
processInstance(Subsets, int, int, Instances, Instance)
- Method in interface chemCast.weka.
InstanceProcessor
processInstance(Subsets, int, int, Instances, Instance)
- Method in class chemCast.weka.
WekaClustering
processInstance(Subsets, int, int, Instances, Instance)
- Method in class chemCast.weka.
WekaSimilarityModel
processIOSettingQuestion(IOSetting)
- Method in class chemCast.application.
StatusBar
ProcessorFilter
<
T
extends IAmbitProcessor> - Class in
chemCast.data
ProcessorFilter()
- Constructor for class chemCast.data.
ProcessorFilter
ProcessorFilter(T)
- Constructor for class chemCast.data.
ProcessorFilter
properties2attributes(Subsets)
- Method in class chemCast.weka.
Subsets2Instances
properties2Instances(Subsets)
- Method in class chemCast.weka.
Subsets2Instances
PropertiesCellRenderer
- Class in
chemCast.ui
PropertiesCellRenderer()
- Constructor for class chemCast.ui.
PropertiesCellRenderer
PropertiesPanelTest
- Class in
chemCast.test.ui
PropertiesPanelTest()
- Constructor for class chemCast.test.ui.
PropertiesPanelTest
PropertiesTableModel
- Class in
chemCast.ui
PropertiesTableModel(Vector, Vector, Vector)
- Constructor for class chemCast.ui.
PropertiesTableModel
property2Instance(Subset, int, Instance)
- Method in class chemCast.weka.
Subsets2Instances
property2Instance(IAtomContainersList, int, Instance, String)
- Method in class chemCast.weka.
Subsets2Instances
propertyChange(PropertyChangeEvent)
- Method in class chemCast.application.
StatusBar
propertyChange(PropertyChangeEvent)
- Method in class chemCast.data.
FilteredMoleculesFile
propertyChange(PropertyChangeEvent)
- Method in class chemCast.similarity.data.
SimilarityModel
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
ChemCastListTableModel
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
HyperGraphSimilarityPanel
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
ListPanel
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
MoleculesTable
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
MoleculesXYZDataset
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
SimilarityMatrixPanel
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
SimilarityResultViewer
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
SubsetsXYPlot
propertyChange(PropertyChangeEvent)
- Method in class chemCast.ui.
VisualizationPanel
PropertyEnabledChangeEvent
- Class in
chemCast.events
PropertyEnabledChangeEvent(IChemCastObject, String, Boolean, Boolean)
- Constructor for class chemCast.events.
PropertyEnabledChangeEvent
PropertyFilter
- Class in
chemCast.data
PropertyFilter()
- Constructor for class chemCast.data.
PropertyFilter
PropertyFilter(Object, Object)
- Constructor for class chemCast.data.
PropertyFilter
PropertyImporterTest
- Class in
chemCast.test.data
PropertyImporterTest(String)
- Constructor for class chemCast.test.data.
PropertyImporterTest
propertyname
- Static variable in class chemCast.events.
ViewModeChangeEvent
Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
L
M
N
O
P
Q
R
S
T
U
V
W