A B C D E F G H I J L M N O P Q R S T U V W

P

p_class - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_classname - Static variable in class chemCast.similarity.data.SimilarityDef
 
p_color - Static variable in class chemCast.similarity.data.Dataset
 
p_decisionMethod - Static variable in class chemCast.similarity.data.ToxTreeSimilarity
 
p_descriptor - Static variable in class chemCast.similarity.data.ChemCastDescriptor
 
p_descriptor - Static variable in class chemCast.similarity.data.DatasetDef
 
p_descriptors - Static variable in class chemCast.similarity.data.ChemCastDescriptorsList
 
p_descriptors - Static variable in class chemCast.similarity.data.DatasetDef
 
p_endpoint - Static variable in class chemCast.similarity.data.Endpoint
 
p_endpoints - Static variable in class chemCast.similarity.data.Endpoints
 
p_filesource - Static variable in class chemCast.similarity.data.DatasetDef
 
p_group - Static variable in class chemCast.similarity.data.Subset
 
p_groups - Static variable in class chemCast.similarity.data.Subsets
 
p_hasgroups - Static variable in class chemCast.similarity.data.SimilarityDef
 
p_identifier - Static variable in class chemCast.similarity.data.DatasetDef
 
p_identifiers - Static variable in class chemCast.similarity.data.DatasetDef
 
p_maxValue - Static variable in class chemCast.data.RangePropertyFilter
 
p_memorysource - Static variable in class chemCast.similarity.data.DatasetDef
 
p_minValue - Static variable in class chemCast.data.RangePropertyFilter
 
p_name - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_note - Static variable in class chemCast.similarity.data.ChemCastDescriptor
 
p_parameter - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_parameters - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_properties - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_query - Static variable in class chemCast.similarity.data.DatasetDef
 
p_result - Static variable in class chemCast.similarity.data.DatasetDef
 
p_similarity - Static variable in class chemCast.similarity.data.SimilarityDef
 
p_similarityMethods - Static variable in class chemCast.similarity.data.SimilarityDefs
 
p_source - Static variable in class chemCast.similarity.data.DatasetDef
 
p_tag - Static variable in class chemCast.data.ObjectPropertyFilter
 
p_tag - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_template - Static variable in class chemCast.similarity.data.DatasetDef
 
p_type - Static variable in class chemCast.similarity.data.ChemCastDescriptor
 
p_type - Static variable in class chemCast.similarity.data.SimilarityDef
 
p_type - Static variable in class chemCast.similarity.data.Subsets
 
p_use_hydrogens - Static variable in class chemCast.similarity.data.NNAtomEnvironmentSimilaritySubsets
 
p_value - Static variable in class chemCast.data.ObjectPropertyFilter
 
p_value - Static variable in interface chemCast.similarity.data.IChemCastObject
 
p_weight - Static variable in class chemCast.similarity.data.ChemCastDescriptor
 
PairwiseSimilarityFilter - Class in chemCast.data
 
PairwiseSimilarityFilter() - Constructor for class chemCast.data.PairwiseSimilarityFilter
 
PairwiseSimilarityFilter(ISimilarityProcessor) - Constructor for class chemCast.data.PairwiseSimilarityFilter
 
parseXMLDocument(Element) - Static method in class chemCast.similarity.data.ChemCastObjectFactory
 
populateValues(Collection<Comparable>) - Method in class chemCast.ui.ObjectPropertyFilterEditor
 
postProcessDistances(double[]) - Method in class chemCast.weka.CosineSimilarity
 
postProcessDistances(double[]) - Method in class chemCast.weka.DiceSimilarity
 
postProcessDistances(double[]) - Method in class chemCast.weka.EuclideanSimilarity
 
postProcessDistances(double[]) - Method in class chemCast.weka.JaccardSimilarity
 
predict() - Method in class chemCast.similarity.data.AtomEnvironmentSimilarity
 
predict(Object, Object) - Method in class chemCast.similarity.data.AtomEnvironmentSimilarity
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.similarity.data.AtomEnvironmentSimilarity
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.similarity.data.FingerprintSimilaritySubsets
 
predict() - Method in class chemCast.similarity.data.FingerprintSimilaritySubsets
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.similarity.data.MCSSSimilarity
 
predict() - Method in class chemCast.similarity.data.MCSSSimilarity
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.similarity.data.NearestNeighborsSimilaritySubsets
 
predict() - Method in class chemCast.similarity.data.NearestNeighborsSimilaritySubsets
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.similarity.data.ToxTreeSimilarity
 
predict() - Method in class chemCast.similarity.data.ToxTreeSimilarity
 
predict() - Method in class chemCast.weka.AbstractWekaModel
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in interface chemCast.weka.ISubsetsModel
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.weka.WekaClustering
 
predict() - Method in class chemCast.weka.WekaClustering
 
predict() - Method in class chemCast.weka.WekaSimilarityModel
 
predict(Object, Object) - Method in class chemCast.weka.WekaSimilarityModel
 
predict(IAtomContainersList, int, IAtomContainersList, int) - Method in class chemCast.weka.WekaSimilarityModel
 
preprocess(IChemObject) - Method in class chemCast.data.AbstractFilter
 
preprocess(IChemObject) - Method in interface chemCast.data.IObjectFilter
 
preprocess(IChemObject) - Method in class chemCast.data.VerhaarSchemeFilter
 
previous() - Method in class chemCast.data.FilteredMoleculesFile
 
previous() - Method in class chemCast.data.MoleculesFile
 
previousIndex() - Method in class chemCast.data.FilteredMoleculesFile
 
previousIndex() - Method in class chemCast.data.MoleculesFile
 
process(Object) - Method in class chemCast.similarity.data.ChemCastDescriptorsList
 
process(SimilarityModel, Subsets) - Method in class chemCast.ui.actions.SimilarityCalculationAction
 
process(Object) - Method in class chemCast.weka.WekaSimilarityModel
 
processInstance(Subsets, int, int, Instances, Instance) - Method in class chemCast.weka.InstanceAdder
 
processInstance(Subsets, int, int, Instances, Instance) - Method in interface chemCast.weka.InstanceProcessor
 
processInstance(Subsets, int, int, Instances, Instance) - Method in class chemCast.weka.WekaClustering
 
processInstance(Subsets, int, int, Instances, Instance) - Method in class chemCast.weka.WekaSimilarityModel
 
processIOSettingQuestion(IOSetting) - Method in class chemCast.application.StatusBar
 
ProcessorFilter<T extends IAmbitProcessor> - Class in chemCast.data
 
ProcessorFilter() - Constructor for class chemCast.data.ProcessorFilter
 
ProcessorFilter(T) - Constructor for class chemCast.data.ProcessorFilter
 
properties2attributes(Subsets) - Method in class chemCast.weka.Subsets2Instances
 
properties2Instances(Subsets) - Method in class chemCast.weka.Subsets2Instances
 
PropertiesCellRenderer - Class in chemCast.ui
 
PropertiesCellRenderer() - Constructor for class chemCast.ui.PropertiesCellRenderer
 
PropertiesPanelTest - Class in chemCast.test.ui
 
PropertiesPanelTest() - Constructor for class chemCast.test.ui.PropertiesPanelTest
 
PropertiesTableModel - Class in chemCast.ui
 
PropertiesTableModel(Vector, Vector, Vector) - Constructor for class chemCast.ui.PropertiesTableModel
 
property2Instance(Subset, int, Instance) - Method in class chemCast.weka.Subsets2Instances
 
property2Instance(IAtomContainersList, int, Instance, String) - Method in class chemCast.weka.Subsets2Instances
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.application.StatusBar
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.data.FilteredMoleculesFile
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.similarity.data.SimilarityModel
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.ChemCastListTableModel
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.HyperGraphSimilarityPanel
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.ListPanel
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.MoleculesTable
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.MoleculesXYZDataset
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.SimilarityMatrixPanel
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.SimilarityResultViewer
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.SubsetsXYPlot
 
propertyChange(PropertyChangeEvent) - Method in class chemCast.ui.VisualizationPanel
 
PropertyEnabledChangeEvent - Class in chemCast.events
 
PropertyEnabledChangeEvent(IChemCastObject, String, Boolean, Boolean) - Constructor for class chemCast.events.PropertyEnabledChangeEvent
 
PropertyFilter - Class in chemCast.data
 
PropertyFilter() - Constructor for class chemCast.data.PropertyFilter
 
PropertyFilter(Object, Object) - Constructor for class chemCast.data.PropertyFilter
 
PropertyImporterTest - Class in chemCast.test.data
 
PropertyImporterTest(String) - Constructor for class chemCast.test.data.PropertyImporterTest
 
propertyname - Static variable in class chemCast.events.ViewModeChangeEvent
 

A B C D E F G H I J L M N O P Q R S T U V W