Uses of Class
chemCast.similarity.data.Subsets

Packages that use Subsets
chemCast.data   
chemCast.similarity.data   
chemCast.test   
chemCast.ui   
chemCast.ui.actions   
chemCast.ui.wizard   
chemCast.weka   
 

Uses of Subsets in chemCast.data
 

Methods in chemCast.data that return Subsets
 Subsets SelectedItem.getDataset()
           
 

Methods in chemCast.data with parameters of type Subsets
 void SelectedItem.setDataset(Subsets dataset)
           
 

Constructors in chemCast.data with parameters of type Subsets
SelectedItem(Subsets dataset, Subset subset, int item)
           
 

Uses of Subsets in chemCast.similarity.data
 

Subclasses of Subsets in chemCast.similarity.data
 class SimilaritySubsets
           
 

Methods in chemCast.similarity.data that return Subsets
 Subsets ToxTreeSimilarity.getDatasets()
           
 Subsets NearestNeighborsSimilaritySubsets.getDatasets()
           
 Subsets MCSSSimilarity.getDatasets()
           
 Subsets FingerprintSimilaritySubsets.getDatasets()
           
 Subsets AtomEnvironmentSimilarity.getDatasets()
           
 

Methods in chemCast.similarity.data that return types with arguments of type Subsets
 java.util.List<Subsets> Endpoint.getSubsets()
           
 

Methods in chemCast.similarity.data with parameters of type Subsets
 void Subsets.add(Subsets subset)
           
 void Endpoint.addSubsets(Subsets subsets)
           
 void SimilaritySubsets.createSubsets(DatasetDef dataset, Subsets subsets)
           
 void Subsets.createSubsets(IAtomContainersList dataset, Subsets subsets)
           
static Instances DescriptorSelection.fingerprints2Instances(ChemCastDescriptorsList descriptors, java.lang.String classProperty, boolean fingerprints, Subsets subsets)
           
 void Endpoint.removeSubsets(Subsets subsets)
           
static boolean DescriptorSelection.selectBestDescriptorsForDataset(AttributeEvaluator evaluator, ChemCastDescriptorsList descriptors, java.lang.String classProperty, Subsets subsets)
           
static boolean DescriptorSelection.selectBestDescriptorsForDataset(ChemCastDescriptorsList descriptors, java.lang.String classProperty, Subsets subsets)
           
static boolean DescriptorSelection.selectBestDescriptorsForSubsets(AttributeEvaluator evaluator, ChemCastDescriptorsList descriptors, boolean fingerprints, Subsets subsets)
          Selects descriptors that best discriminate the subsets.
static boolean DescriptorSelection.selectBestDescriptorsForSubsets(ChemCastDescriptorsList descriptors, Subsets subsets)
           
 void ToxTreeSimilarity.setDatasets(Subsets datasets)
           
 void NearestNeighborsSimilaritySubsets.setDatasets(Subsets datasets)
           
 void MCSSSimilarity.setDatasets(Subsets datasets)
           
 void FingerprintSimilaritySubsets.setDatasets(Subsets datasets)
           
 void AtomEnvironmentSimilarity.setDatasets(Subsets datasets)
           
 void Subsets.updateSubsets(Subsets subsets)
          TODO fire properties
 

Method parameters in chemCast.similarity.data with type arguments of type Subsets
 void Endpoint.setSubsets(java.util.List<Subsets> subsets)
           
 

Constructor parameters in chemCast.similarity.data with type arguments of type Subsets
Endpoint(java.lang.String name, DatasetDef source, SimilarityDefs similarityMethods, java.util.List<Subsets> subsets)
           
 

Uses of Subsets in chemCast.test
 

Methods in chemCast.test with parameters of type Subsets
 void NearestNeighborsSimilaritySubsetsTest.runSubsetTest(NearestNeighborsSimilaritySubsets nns, Subsets datasets)
           
 

Uses of Subsets in chemCast.ui
 

Methods in chemCast.ui that return Subsets
 Subsets MoleculesXYZDataset.getReaders()
           
 

Methods in chemCast.ui with parameters of type Subsets
 void SimilarityMatrixPanel.filterMostSimilar(Subsets subsetsRow, Subset subsetRow, int row, Subsets subsetsCol, Subset subsetCol, int col)
           
 void VisualizationPanel.selectRow(javax.swing.JTable table, int row, Subsets data, java.lang.String propertyName)
           
 void SimilarityMatrixPanel.setColDataset(Subsets datasets, Subset subset)
           
 void SimilarityMatrixPanel.setDataset(Subsets datasets, Subset subset)
           
 void SimilarityMatrixPanel.setRowDataset(Subsets datasets, Subset subset)
           
 void MoleculesXYZDataset.setSubsets(Subsets subsets)
           
 void SimilarityMatrixPanel.showMostSimilar(Subsets subsetsRow, Subset subsetRow, int row, Subsets subsetsCol, Subset subsetCol, int col)
           
 

Constructors in chemCast.ui with parameters of type Subsets
MoleculesXYZDataset(Subsets subsets, java.lang.Object propertyX, java.lang.Object propertyY, java.lang.Object propertyZ, java.lang.Object labelProperty, java.lang.Object tooltipProperty, java.lang.Object colorProperty)
           
MyChart(Subsets[] subsets, java.lang.Object propertyX, java.lang.Object propertyY, java.lang.Object propertyZ, java.lang.Object labelProperty, java.lang.Object tooltipProperty, java.lang.Object colorProperty)
           
 

Uses of Subsets in chemCast.ui.actions
 

Methods in chemCast.ui.actions with parameters of type Subsets
 void SimilarityCalculationAction.process(SimilarityModel model, Subsets subsets)
           
 

Uses of Subsets in chemCast.ui.wizard
 

Methods in chemCast.ui.wizard that return Subsets
 Subsets EndpointsWizard.getSubset()
           
 

Constructors in chemCast.ui.wizard with parameters of type Subsets
SimilarityWizard(java.awt.Container owner, SimilarityDefs similarityMethods, SimilarityDef selected, Subsets subsets)
           
SubsetWizard(java.awt.Container frame, Subsets subsets, DatasetDef dataset)
           
 

Constructor parameters in chemCast.ui.wizard with type arguments of type Subsets
EndpointsWizard(java.awt.Container owner, Endpoints endpoints, java.util.List<Subsets> subsets, int selected)
           
 

Uses of Subsets in chemCast.weka
 

Methods in chemCast.weka that return Subsets
 Subsets ISubsetsModel.getDatasets()
           
 Subsets AbstractWekaModel.getDatasets()
           
 

Methods in chemCast.weka with parameters of type Subsets
 void WekaSimilarityModel.processInstance(Subsets datasets, int subsetIndex, int objectIndex, Instances instances, Instance instance)
           
 void WekaClustering.processInstance(Subsets datasets, int subsetIndex, int objectIndex, Instances instances, Instance instance)
           
 void InstanceProcessor.processInstance(Subsets datasets, int subsetndex, int objectIndex, Instances instances, Instance instance)
           
 void InstanceAdder.processInstance(Subsets datasets, int subsetndex, int objectIndex, Instances instances, Instance instance)
           
 FastVector Subsets2Instances.properties2attributes(Subsets subsets)
           
 Instances Subsets2Instances.properties2Instances(Subsets subsets)
           
 void ISubsetsModel.setDatasets(Subsets datasets)
           
 void AbstractWekaModel.setDatasets(Subsets datasets)